PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN03792.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 173aa    MW: 19333.3 Da    PI: 9.897
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN03792.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH110.00082183955
                TCHHHHHHHHHHHHHHH CS
         HLH 39 sKaeiLekAveYIksLq 55
                +Ka+iL  ++eY+k+L+
  KHN03792.1  2 DKASILGDTIEYVKQLR 18
                8**************95 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:4.10.280.102.1E-7133IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.7E-5134IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 173 aa     Download sequence    Send to blast
MDKASILGDT IEYVKQLRRK IQELEARNRQ MTEAEQRSKL PEIAVQRTSS SSSKEQQRSG  60
VTMTEKRKVR IVEGVVAKAK AVEAEATTSV QVSIIESDAL LEIECRHKEG LLLDVMQMLR  120
EVRIEVIGVQ SSLNNGVFVA ELRAKVKENA NGKKVSIVEV KRALNQIIPH AVD
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150411e-123AP015041.1 Vigna angularis var. angularis DNA, chromosome 8, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006588626.11e-114PREDICTED: basic helix-loop-helix protein A-like
SwissprotE3SXU41e-69BHLHW_PEA; Basic helix-loop-helix protein A
TrEMBLA0A0B2P8611e-120A0A0B2P861_GLYSO; Transcription factor TT8
TrEMBLK7LH171e-116K7LH17_SOYBN; Uncharacterized protein
TrEMBLK7LH161e-114K7LH16_SOYBN; Uncharacterized protein
STRINGGLYMA10G03140.21e-113(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF36373249
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G09820.13e-29bHLH family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]